Boutique hotel vacation rentals in San Juan Islands

Find and book unique boutique hotel rentals on Airbnb

Top-rated boutique hotel rentals in San Juan Islands

Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.

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Guest favorite

Boutique hotel in Cobble Hill, Canada

5.0 out of 5 average rating, 65 reviews

Welcome to Lavender View

Serenity and quality abound. We want your stay at Lavender View to be exceptional. We offer luxurious accommodation and top quality service in a resort-like setting on 2.5 acres. We use the Airbnb platform exclusively to handle all of our reservations. However, we encourage you to visit our own website (Lavenderview dot ca). Our website provides more information & detail on who we are and what we offer. The “Book Now” button will take you back to this Airbnb listing to make your reservation.

Nov 1 – 8

G$40,951 GYD per night

Guest favorite

Boutique hotel in Coupeville, Washington, US

4.98 out of 5 average rating, 97 reviews

Anchorage Inn - room #4 - The Onward

The Onward (rm 4) is in our turret, has a water view, queen bed for 2, full private bath, smart TV streaming, & fiber WiFi. Refrigerator, microwave & Keurig coffee maker are available. You can enjoy a hot breakfast served in the dining room on the first floor for NO FEE. Our award winning Inn has 6 rooms, all with different prices because they all offer a different combination of space, K or Q bed, and views. These rooms range in price depending on that combination and the time of year.

Mar 27 – Apr 3

G$54,286 GYD per night

Guest favorite

Boutique hotel in Friday Harbor

4.99 out of 5 average rating, 91 reviews

Private guesthouse immersed in nature

Your private guesthouse awaits at ~ Inn at Saltwater Farm ~ a modern, Scandinavian-style, boutique inn situated on 162 wild and beautiful acres just outside the town of Friday Harbor. Escape to your separate and private guesthouse with breathtaking views, modern amenities, and miles of trails, gardens, and natural beauty to explore. Private deck & floor-to-ceiling windows with a cozy & intimate woodsy view. Wheelchair accessible. KING bedroom + QUEEN loft + DOUBLE sleeper sofa + bathroom.

May 5 – 10

G$70,818 GYD per night

Boutique hotel in Seattle, Washington, US

4.89 out of 5 average rating, 105 reviews

College Inn (Small Euro-Style Twin - Shared Bath)

Our family-owned College Inn is an authentic European-style* hotel in the heart of Seattle's vibrant University District & on the campus of the University of Washington, surrounded by restaurants, shops, cafes, and pubs. Newly remodeled in 2019, our guests enjoy modern comforts while in a hotel that is on the National Register of Historic Places. *In the tradition of "European-style" hotels, we have a Loft common area, shared kitchen & SHARED BATHROOMS for our European-style rooms.

Jan 1 – 8

G$19,065 GYD per night

Superhost

Boutique hotel in Port Townsend, Washington, US

5.0 out of 5 average rating, 4 reviews

Bay View Room in the Heart of Port Townsend!

Wake up to views of Port Townsend Bay in our seaport boutique hotel! This second-floor room offers one queen bed, full private bath, HDTV, small refrigerator, microwave, in-room coffee/tea service. There is free Wi-Fi and on-site parking. Hair dryer, iron with board. Located in the heart of Port Townsend's cultural and historic district, the Swan is adjacent to Point Hudson Marina and just steps away from educational programs at the Northwest Maritime Center.

Jan 4 – 11

G$47,373 GYD per night

Boutique hotel in Port Townsend

4.57 out of 5 average rating, 230 reviews

Historic Innkeepers Apartment at winery

Private apartment at beautiful 1908 Inn at winery close to Port Townsend. Quiet setting 5 minutes to town. Main room includes kitchenette, dining area and couch that converts to a bed, the bedroom has a queen size bed, plus a laundry room, bathroom with claw foot tub, private entry, and private porch. Beautiful 12 acre estate with winery tasting room on site. Pets must be be pre-approved and must be in care of owners at all times and leashed when outdoors.

May 26 – Jun 2

G$23,214 GYD per night

Superhost

Boutique hotel in Seattle, Washington, US

4.9 out of 5 average rating, 137 reviews

Charming Room in Historic BnB (Rm6)

Located in the heart of vibrant Capitol Hill, this private room & bath is situated in a Victorian inn. Enjoy the 1906 historic charm with modern amenities. All rooms feature fast wifi, lots of outlets, private bath, plenty of closet space, SmartTV, & laptop friendly workspace. The Foxglove Inn is just a block from the light rail station, multiple bus stops & streetcar. Walk to numerous restaurants, coffee shops, parks, and shopping all just minutes away!

Jul 12 – 19

G$49,779 GYD per night

Guest favorite

Boutique hotel in Sequim

5.0 out of 5 average rating, 6 reviews

King Room with Jetted Tub

A private room on the mountain side of a 7-acre waterfront property, with private beach access! Enjoy a cozy ambiance in your provided robes, sitting by the electric fireplace, or soak in the over-sized jetted tub. This studio room has a kitchenette (fridge, microwave, coffee maker). Our property also has a shared gazebo, a mini-shopping mart (for guests only), and an electric vehicle charging station if you need.

Sep 2 – 9

G$69,505 GYD per night

Guest favorite

Boutique hotel in Port Townsend

4.94 out of 5 average rating, 123 reviews

Downtown Studio Art Suite ~ NO Fees & Snack Bar!

Discover the epitome of comfort and style at our Deluxe Queen Suite, perfect for couples or solo travelers seeking a memorable stay. Nestled in the vibrant heart of downtown PT, you'll find yourself just steps away from the excitement – 16 steps, to be exact! Your Superhosts, true local experts, eagerly await your preferences to tailor your stay to perfection. No Cleaning Fee! Overnight Parking! Snack Bar!

Oct 21 – 28

G$28,417 GYD per night

Guest favorite

Boutique hotel in Friday Harbor, Washington, US

4.98 out of 5 average rating, 55 reviews

Green Tea room at Juniper Lane

Juniper Lane Guest House, a hip and unique boutique Inn on San Juan Island. This unique Friday Harbor accommodations is a custom crafted bold mosaic of exotic woods, tile, art, and color. Nestled on the edge of Friday Harbor overlooking Beaverton Valley it has a rural feel yet is still close to town. This Boutique Inn offers a variety of accommodations that are “brilliant and affordable” for everyone.

May 18 – 23

G$35,934 GYD per night

Superhost

Boutique hotel in Sequim

4.83 out of 5 average rating, 198 reviews

3-NW Rustic Cabin on the water-Beach-full kitchen

Step into the Great Pacific Northwest. Relax in the laid-back rustic look of the PNW, while gazing out onto the Strait of Juan de Fuca. This is a studio cabin with everything you will need to just get away and relax. Sleep in the Queen Log Bed while gazing at the water (or the 65" TV). This cottage has a full kitchen and allows dogs (no cats) for a fee of $25-$45 per pet per night.

Oct 19 – 26

G$34,610 GYD per night

Superhost

Boutique hotel in Lopez Island, Washington, US

4.92 out of 5 average rating, 100 reviews

•Sweet Island Hotel• Fireplace, Soaking Tub, WIFI

✔ Super Fast WIFI ✔ Fireplace ✔ In Room Coffee + Decaf & Tea ✔ Full Bathroom w. Soaking Tub ✔ 24/7 Staff That There When You Need Them and Never When You Don't :) ✔ Access to All Common Spaces at Edenwild Boutique Hotel ✔ Onsite Bicycle and Kayak rentals We think of every aspect of your stay, and our staff is always there when you need us and never when you don’t.

Sep 25 – Oct 2

G$84,596 GYD per night