
Boutique hotels in Marathon
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Top-rated boutique hotels in Marathon
Guests agree: these boutique hotels are highly rated for location, cleanliness, and more.

Large House w/ FREE Sailboat, Kayaks, Snorkel etc
The Main House is a cottage at Key Largo Cottages. We are located on the bay side of Key Largo near some of the best dive/snorkel sites, island excursions, bars, restaurants, & the Everglades. Experience water fun! A stay in one of our cottages comes with unlimited use of our kayaks, canoes, paddle boards, snorkel gear, fishing gear, &, of course, the use of one of our 22' sailboats, if you have recent sailing experience on keel boats! You won't find a better deal in the Keys!

Conch Key Villas #1. Fun, fishing & great sunsets
Studio One's waterfront rental is located on the ground level. Our units differ vastly from other Florida Keys lodgings because our property is right on Florida Bay. If you trailer your boat, the dockage is a few feet from the back door. Our docks can handle boats up to 25’ and you can park your trailer in our front lot. There is a boat ramp just two blocks away. Studio 1 can sleep 2 adults and one child (up to 12 years). We have a king size bed and a futon.

Marathon Beachfront | 2BR, Veranda + 2 Luxe Baths
Enjoy direct beach access from the Oceanfront Veranda | 2BR 2Qns 1King guestroom, a spacious beachfront retreat with a king bed, two queen beds, and two deluxe bathrooms. Relax on your private veranda, indulge in a spa-like bath with a rainfall shower and soaking tub, and enjoy modern comforts like complimentary WiFi and an entertainment system. Experience five pools, oceanfront dining, and endless adventures in the Florida Keys.

Marathon Oceanfront | ADA Queen + 5 Pools
Experience comfort and accessibility in the Oceanfront Balcony Queen ADA room. Designed for a seamless stay, this ADA-compliant retreat features a queen bed, a fully accessible deluxe bathroom, and a private oceanview terrace. Thoughtful details like wide doors, roll-in shower, and hearing-impaired features ensure ease and relaxation. Enjoy five pools, beachfront dining, and oceanfront luxury in the heart of the Florida Keys.

Marathon Beachfront | 1BR Veranda + Luxury Bath
Step directly onto the sand from the Oceanfront Veranda | 1BR King (Suite) in Marathon. This spacious beachfront retreat features a plush king bed, a queen sofa bed, and a private veranda. Indulge in a spa-like bath with a walk-in rainfall shower and enjoy modern comforts like complimentary WiFi and an entertainment system. Experience five pools, oceanfront dining, and endless adventures in the Florida Keys.

Wreckers House King Room - Adults Only
Adults-only building for guests ages 21+ only. Thoughtfully furnished with mixed metals and woods, the Wreckers House tells the story of ships and their crews of "wreckers" who once salvaged goods from the sunken ships in the Florida Keys. Enjoy a sunrise view and an ocean breeze from your private balcony that overlooks the pool and the Atlantic. This room has a mini fridge and an espresso machine.

Family Room in Duck Key | Sauna, Kayak & Pools
Gather the crew in the Family Oasis—a bright, roomy hideaway where bunk beds delight the kids and a plush king bed welcomes parents. Ideal for up to five guests, this relaxing space blends laid-back comfort with family-ready convenience. Located in Hawks Cay Resort, enjoy a full day of waterside fun, unwind in your oversized room, and let island time set the pace for your unforgettable stay.

Marathon Oceanfront Suite | Balcony + Kitchenette
Wake up to stunning ocean views from the Oceanfront Balcony | 1BR King + Kitchenette (Suite). This spacious retreat offers a plush king bed, a separate living area with a queen sofa bed, and a private oceanview terrace. Enjoy a kitchenette, luxurious bath, and seamless indoor-outdoor living. With five pools, beachside dining, and endless adventure, your dream Florida Keys escape begins here.

Marathon Oceanfront Room | 2Queens + Spa-Like Bath
Wake up to breathtaking ocean views in the Oceanfront Balcony | Double Queen room. Featuring two plush queen beds, a spa-like bath with a deep soaking tub and walk-in rainfall shower, and a private oceanview balcony, this retreat offers the perfect blend of comfort and luxury. Experience premium amenities, five breathtaking resort pools, beachfront dining, and an array of endless adventures.

Marathon Beachfront | ADA 2 Queens + Veranda
Enjoy oceanfront accessibility in the Oceanfront Veranda | Double Queen ADA in Marathon. This room features two queen beds, a fully accessible bath, and a beachfront veranda with direct sand access. Designed for comfort with roll-in showers, handrails, and hearing-impaired features, it offers ease and luxury. Experience pools, dining, and resort amenities in the Florida Keys.

Marathon Beachfront | King Bed + Veranda
Wake up to breathtaking ocean views and step directly onto the sand from the Oceanfront Veranda | King room. This luxurious beachfront retreat features a plush king bed, a spa-like bath with a deep soaking tub and walk-in rainfall shower, and a private beachfront veranda. Enjoy modern comforts, five pools, oceanfront dining, and endless adventure in the Florida Keys.

Marathon Beachfront | 2 Queens + Veranda
Wake up to ocean views and direct beach access in the Oceanfront Veranda | Double Queen room in Marathon. This coastal retreat features two queen beds, a spa-like bath with a soaking tub and rainfall shower, and a private beachfront veranda. Enjoy modern amenities, complimentary WiFi, and access to five pools, beachfront dining, and endless Florida Keys adventures.
Popular amenities for Marathon boutique hotels
Family-friendly boutique hotels
Boutique hotels with a patio

Resort View Family Suite

Conch Key Villas #1. Fun, fishing & great sunsets

Wreckers House Double Queen Room - Adults Only

Galleon King Suite - Adults Only
Other boutique hotel vacation rentals

Wreckers House King Room - Adults Only

Marathon Beachfront | 2 Queens + Veranda

Marathon Beachfront Suite | 1BR Veranda +Luxe Bath

Marathon Beachfront | King Bed + Veranda

Marathon Oceanfront Suite | Balcony + 2 Luxe Baths

Marathon Beachfront | 2BR, Veranda + 2 Luxe Baths

Conch Key Villas #1. Fun, fishing & great sunsets

Marathon Oceanfront Suite | Balcony + Kitchenette
Quick stats about boutique hotels in Marathon

Total vacation rentals
Explore 30 vacation rentals in Marathon

Nightly prices starting at
Marathon vacation rentals start at G$62,795 GYD per night before taxes and fees

Verified guest reviews
Over 1,560 verified reviews to help you choose

Pet-friendly vacation rentals
Find 10 rentals that welcome pets

Vacation rentals with a pool
30 properties feature pools

Rentals with dedicated workspaces
10 properties have a dedicated workspace

Wi-Fi availability
30 of Marathon vacation rentals include wi-fi access

Popular amenities for guests
Guests love Kitchen, Wifi, and Pool across Marathon rentals

4.7 Average rating
Marathon stays receive an average rating of 4.7 out of 5 from guests
Destinations to explore
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- Boutique hotels Monroe County
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- Everglades National Park
- Sombrero Beach
- Smathers Beach
- Ernest Hemingway Home & Museum
- Calusa Campground
- Robbies Marina Of Islamorada
- Seven Mile Bridge
- Theater of the Sea
- Bahia Honda State Park
- Fort Zachary Taylor Historic State Park
- The Turtle Hospital
- Florida Keys Aquarium Encounters
- Conch Key
- Key Largo Kampground And Marina
- Dolphin Research Center
- Founder's Park
- Key West Butterfly & Nature Conservatory
- Southernmost Point
- Harry Harris Beach and Park
- History Of Diving Museum
- Key West Lighthouse Museum
- The Rain Barrel Village
- Mel Fisher Maritime Museum
- Truman Little White House









