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Boutique hotels in South Aegean

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Top-rated boutique hotels in South Aegean

Guests agree: these boutique hotels are highly rated for location, cleanliness, and more.

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Guest favorite
A private outdoor area features a sparkling hot tub and two lounge chairs positioned beside it. Striped cushions adorn the chaise lounges, while greenery in the background adds a natural touch. The serene setting is enclosed by whitewashed walls, offering a sense of privacy.
Hotel room in Megalochori

Majestic Sky Grey Suite with Private Grand Hot Tub

Deluxe Grey Suite with Grand Hot Tub (55m²) can host 1-3pax. It has a kind-sized bedded bedroom, a cozy living and seating area with a single sofa bed ,a bathroom with shower and free toiletries, bathrobes and slippers , a small kitchen with kitchenware and an electric hot plate, private veranda with grand hot tub and outdoor furnitures to fully enjoy your stay . Our beautiful new brand suite in minimal style are waiting for you! We offer comfort and traditional luxury to our guests.

4.86 out of 5 average rating, 109 reviews
Top guest favorite
An outdoor terrace features a covered seating area with a neutral-colored cushion and a small table adorned with fresh fruit. A large, decorative umbrella offers shade, while stunning views of the ocean and coastline extend in the background, enhancing the tranquil setting.
Hotel room in Merovígli

301. Suite with Outdoor Jacuzzi

This elegant suite’s special features are its private hot tub and spa bath, creating the perfect setting for a romantic and relaxing escape. The air-conditioned suite includes one bedroom with a queen-size bed, a modern bathroom with a walk-in shower and hairdryer, and a private terrace offering amazing sea and sunset views. For your convenience, the suite also features a tea and coffee maker and a flat-screen TV. Ideal for couples seeking comfort, style, and unforgettable views.

4.98 out of 5 average rating, 90 reviews
Superhost
A spacious sleeping area is highlighted by a stone accent wall and warm wooden beams. A large bed with a neutral-toned coverlet is positioned opposite a flat-screen TV. Soft lighting enhances the minimalist decor and creates a calming ambiance.
Hotel room in Santorini

Floria Suites - Deluxe Cave Suite with Spa Bath

The Deluxe Cave Suite offers indoor Hot Tub A/C, flat-screen TV, a living room with a sofa, a well-equipped kitchen and a private bathroom with shower, a hairdryer and free toiletries. Floria Suites offers a seasonal outdoor swimming pool, a terrace and accommodations with a patio and free WiFi. Karterados Beach is 2.9 km from Floria Suites, while Monolithos Beach is 2.9 km from the property. The nearest airport is Santorini International Airport, 3.9 km from the accommodation.

4.91 out of 5 average rating, 245 reviews
Guest favorite
An outdoor veranda features a private heated plunge pool overlooking the sea and caldera. Nearby, a dining table and sunbeds provide a space for relaxation. Soft light warms the scene during sunset, highlighting the natural beauty of the surrounding landscape.
Hotel room in Akrotiri

Premium Spa Suite with Heated Plunge Pool

The Premium Spa suite offering uninterrupted views of the Volcano, Caldera and the sea. Each suite is a private modern spa. They all feature a private hamam, hydro massage and aroma therapy in the bathroom while the suites come with a private heated plunge pool at the outdoor veranda with caldera views. Plenty of services are available, daily room service with choices of breakfast served privately in your suite and spa massage treatments upon request

4.92 out of 5 average rating, 180 reviews
Guest favorite
A hot tub is positioned on a spacious terrace, offering views of the Aegean Sea and surrounding landscape. The clean lines of the white walls contrast with the blue water, and a soft towel rests nearby, inviting relaxation.
Hotel room in Vourvoulos

Evita Guesthouse |Jacuzzi |Sea View| Free parking

Welcome to Evita Guesthouse! Located in the traditional village of Vourvoulos, just 5 minutes from the beach and 5 minutes from Fira, the vibrant center of Santorini, the suite offers the perfect balance of privacy and convenience. Enjoy the magical sunrise and views over the endless blue of the Aegean Sea, in a peaceful setting designed for relaxation and comfort. Ideal for couples, friends, or small families seeking a stylish and tranquil stay!

4.92 out of 5 average rating, 203 reviews
Guest favorite
A spacious room features elegant furnishings with a double bed, complemented by decorative pillows. Soft lighting from a chandelier illuminates the area. Two large windows with red drapes allow natural light to enter, while a small seating area with a striped chair provides additional comfort.
Hotel room in Rethymno

Romantic Double Room in the Old Venetian Mansion

Located in the heart of Rethymno Old Town, Archontiko is housed in a restored Venetian building of the 12th century. It offers 4 comfortable and cozy rooms (breakfast is available at extra charge), a cafe-bar, a reception area, and a roof-top terrace with a breath-taking view over the Old Town and famous Fortezza Castle. The beauty of the building, together with carefully selected interiors, creates a spirit of the Venetian epoch in Crete.

4.84 out of 5 average rating, 208 reviews
Top guest favorite
A private balcony features a hot tub with panoramic views of the shimmering sea and distant islands. Minimalist decor includes potted plants, while sunlight filters through the space, enhancing the serene ambiance.
Hotel room in Santorini

Asma suites - Economy suite, sunset volcano view

It is a small luxury hotel. It has only five private suites with private bathrooms. Each suite has its private balcony, private outside hot tub and amazing views to the volcano and sunset. The hotel is located in the heart of Fira. Very close to the hotel is the central bus station, the main square. We are here to welcome you if you are looking for a calm, quiet, private suite with amazing views.

4.94 out of 5 average rating, 138 reviews
Guest favorite
An inviting plunge pool is framed by an archway, offering a glimpse of the Aegean Sea and outdoor dining area. Clear water reflects the surroundings, creating a serene atmosphere. The view beyond highlights the tranquility of the private space.
Hotel room in Merovígli

Queen Suite with outdoor heated plunge pool

Queen Suite can easily accommodate 1 to 3 persons with one bedroom with double bed, one sofa bed for extra guest, all necessary equipment for making your morning coffee or tea, living room, bathroom with double shower, private furnished balcony and outdoor heated plunge pool with caldera and volcano view.Enjoy easy access to popular shops and restaurants from this charming place to stay.

4.95 out of 5 average rating, 171 reviews
Top guest favorite
A private balcony features a wooden table adorned with a small bowl and cup, set beside a plush grey sofa. The balcony overlooks a stunning sea view with hints of distant islands, complemented by a private hot tub and lush greenery in planters.
Hotel room in Merovígli

Sunset, Grotto Living Suite, Jacuzzi

Start your day on your private balcony, soaking in breathtaking views of the caldera, volcano, and endless sea. Located on the ground floor, this suite features a cozy double bedroom, a living room with a sofa and dining table, and a luxurious bathroom. With its serene terrace, outdoor jacuzzi, and unforgettable sunsets..

4.98 out of 5 average rating, 49 reviews
Top guest favorite
A lush garden area is seen, featuring a variety of tropical plants and pathways that lead towards the beach. Sunbeds and umbrellas dot the sandy shore in the background, offering a view of the sea and distant land along the horizon.
Hotel room in Kamari

1.OceanisBay breakfast by the beach

Private room for 2 persons at the ground floor...with sea view. Fresh, clean, stylish with balcony and view to the gardens and sea. Free sunbeds & umbrellas on the beach. Breakfast is served every morning at your room,balcony or at garden/included

4.96 out of 5 average rating, 163 reviews
Superhost
An open living area features large glass doors leading to a Mediterranean sea view. A white sofa, wooden dining table, and chairs are present, complemented by indoor plants. Natural light fills the room, enhancing the serene coastal atmosphere.
Hotel room in Rethymno

North Coast - Superior Apartment with Sea View

The Superior Apartment Sea View consists of 1 bedroom with 1 double and 1 sofa bed. This Apartment has furnished with designer furniture and has stunning Mediterranean sea views.

4.93 out of 5 average rating, 101 reviews
Guest favorite
An elegant swimming pool is positioned beneath a modern cave-like structure, framed by a curved archway. Soft light reflects off the water, creating gentle ripples. A sun lounger and small table are visible, alongside natural stone elements that enhance the serene atmosphere.
Hotel room in Exo Katoikies

Senior Two Bedroom Suite with Pool & Sea View

The splendid Senior suite is distinguished by the plenteous space and accented with sumptuous modern décor blended with traditional touches and many other luxurious facilities.

4.92 out of 5 average rating, 308 reviews

Popular amenities for South Aegean boutique hotels

KitchenWifiPoolFree parking on premisesAir conditioning

Family-friendly boutique hotels

Superhost
Hotel room in Profitis Ilias

Makani Boutique Suites - 5. Deluxe Suite Terrace

4.82 out of 5 average rating, 17 reviews
Guest favorite
A spacious villa reflects in the clear waters of a swimming pool, surrounded by lush greenery. The exterior is accentuated by warm yellow shutters and climbing plants, while a sunset sky casts soft hues above the property, enhancing its tranquil charm.
Hotel room in Vothonas

Beautiful Villa Ideal for Families Car Included

5.0 out of 5 average rating, 31 reviews
Guest favorite
A private terrace is featured with a hot tub and a wooden pergola providing shade. Comfortable seating and a round dining table are arranged under the pergola, while views of the surrounding rooftops and mountains are visible in the background.
Hotel room in Naxos

Naxos Town Sea View Apartment Korali Hotel

4.93 out of 5 average rating, 45 reviews
Superhost
A private heated Jacuzzi is visible on a terrace, surrounded by minimalist features. The sparkling water reflects the clear blue sky and provides views of the deep blue Aegean Sea, with distant islands on the horizon and lush greenery enhancing the landscape.
Hotel room in Merovígli

Luxury Suite with Heated Jacuzzi and Sea View

4.82 out of 5 average rating, 718 reviews
Superhost
A well-lit swimming pool is surrounded by a wooden pergola and lounge chairs. The shallow area is highlighted, with steps leading into the water. A bar area features seating and overlooks the pool, while umbrellas provide shade nearby.
Hotel room in Naxos

Superior Triple Room | Golden Sand Hotel Naxos

5.0 out of 5 average rating, 4 reviews
Superhost
Hotel room in Plaka

Executive Suite Sea view | Lithia Exclusive Villas

5.0 out of 5 average rating, 4 reviews
Guest favorite
A spacious outdoor area showcases a sparkling pool surrounded by shaded seating and umbrellas. Lush greenery and various seating arrangements create inviting spots for relaxation, while distant mountains serve as a backdrop, adding a sense of tranquility to the environment.
Hotel room in Paros

B&B Onira with pool, next to the beach

4.95 out of 5 average rating, 61 reviews
Guest favorite
A white tray is placed on the bed, featuring two green apples, a glass of milk, and an open book. The background displays a spacious bed with stacked pillows in light blue covers, providing a serene and inviting ambiance.
Hotel room in Paros

Superior 1 Apollon Design Boutique Hotel Paros

4.92 out of 5 average rating, 83 reviews

Boutique hotels with a patio

Top guest favorite
A comfortable lounge chair is positioned on a private terrace, offering a panoramic view of the Aegean Sea and surrounding coastline. The terrace features light-colored tiles and a glass railing, enhancing the space's openness to the gentle sea breeze.
Hotel room in Merovígli

Standard Suite| Outdoor Jetted Tub | Caldera View

5.0 out of 5 average rating, 17 reviews
Top guest favorite
A serene bedroom is showcased with smooth white walls and a spacious bed featuring a light blue throw. A modern television is mounted on the wall, while a small dining area with a table and chairs is visible. Natural light fills the room from the open doorway leading to the private veranda.
Hotel room in Karterados

Comfort Suite with Heated Jacuzzi

5.0 out of 5 average rating, 18 reviews
Superhost
Hotel room in Faliraki

Pado Living - Double Room with Balcony

5.0 out of 5 average rating, 3 reviews
Superhost
Hotel room in Mykonos

Deluxe Triple Apartment

Superhost
A cozy kitchen area features wooden shelving and modern appliances, including a stove and a sink. Natural light streams through the glass door that opens to a scenic view outside. A small table is placed on a woven rug, enhancing the warm, inviting space.
Hotel room in Mykonos

HERMIS Sea view Sunset Suite [Mykonos High]

Superhost
A relaxing poolside scene features lounge cushions placed beside a tranquil pool. Lush greenery climbs a white wall, while a towel hangs nearby. The still water reflects the blue sky, creating a serene atmosphere, ideal for unwinding under the sun.
Hotel room in Alyki

2 bedrooms in Afordite Boutique Hotel at Paros 6p.

Top guest favorite
A shaded terrace area features a sleek, shallow pool beside a comfortable seating space with gray cushions. A ladder holds a soft towel, and a stylish table holds a drink, with an inviting indoor room visible through the open glass door.
Hotel room in Fira

Grand Suite with Hot Tub, Fira Santorini

5.0 out of 5 average rating, 12 reviews
Guest favorite
A serene private pool overlooks the Santorini Caldera, surrounded by smooth stone walls and modern furnishings. Crisp blue water reflects the sky, while sun loungers provide a relaxing spot to enjoy the tranquil views. The landscape features islands in the distance, enhancing privacy.
Hotel room in Akrotiri

Acro Luxury Villa

5.0 out of 5 average rating, 25 reviews

Other boutique hotel vacation rentals

Superhost
Hotel room in Vourvoulos

iL Fagiolo 6|Sea View|Privacy|Jacuzzi|Free Parking

5.0 out of 5 average rating, 4 reviews
Top guest favorite
An infinity pool extends towards the horizon, reflecting shades of blue against a backdrop of the Caldera. Nearby, a person dances joyfully, highlighting the vast expanse of the sea and islands visible in the distance, illuminated by the soft glow of sunset.
Hotel room in Santorini

Standard Apartment / sea views

4.97 out of 5 average rating, 67 reviews
Guest favorite
Hotel room in Santorini

San Giorgio - Two-Bedroom Family Room

4.93 out of 5 average rating, 67 reviews
Top guest favorite
An outdoor area is showcased at dusk, featuring a large shared pool surrounded by sunbeds and umbrellas. The surrounding gardens are highlighted with soft lighting, and the unique architecture of the residence is visible against a serene sky, creating a tranquil atmosphere.
Hotel room in Oia

Grand Suite Hot Tub Sea View "Ammoudi"

4.96 out of 5 average rating, 71 reviews
Guest favorite
The elegantly designed exterior of the complex showcases a modern architectural style with textured walls and strategically placed windows. Outdoor seating areas are furnished with black wicker chairs and small tables, surrounded by carefully placed greenery and a clear sky above.
Hotel room in Foinikiá

Alyvia Deluxe Suite with Hot Tub and Sea View

4.91 out of 5 average rating, 65 reviews
Guest favorite
A private terrace showcases a heated pool surrounded by sun loungers and a shaded area. The expansive view captures the caldera and distant islands, under a clear blue sky, creating a serene atmosphere for relaxation.
Hotel room in Santorini

Me & You Exclusive Suite with private pool

4.94 out of 5 average rating, 17 reviews
Guest favorite
A modern suite features a spacious sleeping area with a double bed and a cozy seating area with a built-in sofa. Natural light enters through light curtains, illuminating the minimalist decor. A unique wooden mirror and decorative accents enhance the room's aesthetic.
Hotel room in Mykonos

VillaElina topfloor suite for3sea view with jakuzi

4.89 out of 5 average rating, 53 reviews
A bedroom is furnished with a spacious bed featuring a soft pink headboard. Light wooden floors complement the warm tones of the decor. Large windows with pink and green curtains allow natural light to enter, and a small desk area is situated near the staircase.
Hotel room in Rethymno

Superior suite with mezzanine

4.85 out of 5 average rating, 102 reviews

Destinations to explore